瓜类褪绿黄化病毒及其系统进化分析

【目的】检测新疆南疆7个县/市瓜类褪绿黄化病毒(Cucurbit chlorotic yellows virus, CCYV),进行系统发育分析,为新疆南疆CCYV预警和防控提供参考。【方法】于2019年,从中国新疆南疆7个县/市采集带有黄化特征的51份甜瓜叶片样品,RT-PCR进行CCYV的检测,进行特异性片段的克隆、测序和系统发育分析。【结果】中国新疆巴楚县、阿克苏市、莎车县、伽师县、疏勒县、疏附县均未检测到CCYV,而洛浦县的13份样本中,8份检出为CCYV阳性,检出率为61.53%,洛浦县CCYV特异性片段克隆测序获得了685 bp的核酸序列,与GenBank中的CCYV分离物外壳蛋白(Coat protein, CP)的一致性达到100%。所得序列与中国新疆(吐鲁番)、中国其他省、苏丹、日本、塞浦路斯、黎巴嫩的CP基因聚在I组(Group),沙特阿拉伯的分离物聚在Ⅱ组,伊朗的分离物聚在Ⅲ组。【结论】CCYV在中国新疆南疆洛浦县甜瓜产区发生,与中国新疆吐鲁番、中国其他省及周围国家的CCYV分离物亲缘关系很近,且群体遗传变异很小。     

5种蔷薇科树种多酚氧化酶比较基因组学分析

蔷薇科植物中有多种具有重要价值的水果,如苹果、梨、桃、草莓和黑树莓等。这些水果普遍容易发生由多酚氧化酶(PPO)介导的酶促褐变而导致重大经济损失,从全基因组角度分析比较PPO基因家族,有助于加深对PPO基因家族和功能的认识。采用比较基因组学的方法,对这5种植物的PPO基因家族进行了基因鉴定、染色体定位、编码蛋白的亚细胞定位、内含子统计分析、基因系统进化、基因倍增与丢失等特征分析。从这5种植物中,共计鉴定出了42个PPO基因,其中6个基因被认定是假基因;绝大多数基因编码的蛋白定位于叶绿体,2个定位于线粒体,3个是分泌型蛋白;PPO基因在染色体上有串联重复和散布两种形式;9个基因具有内含子,聚类结果显示可以将它们分为6个类型,每个基因类型在进化过程中都发生过基因倍增和丢失;同型基因内含子的位置和大小具有相似性。这些结果揭示蔷薇科植物PPO基因内含子是伴随着基因倍增产生的,基因倍增也是推动PPO基因多样化的重要动力,PPO基因倍增和丢失差异导致PPO基因数量在不同物种之间产生差异。     

The Phytotoxicity of Various Graminicides in Durum Wheat in Greece

The effect of three herbicides, diclofop-methyl (DM), imazamethabenz-methyl (IM) and fenoxaprop-ethyl (FE), was investigated at the recommended rate (×) and double the recommended rate (2×) in a durum wheat crop. FE had the smallest effect on root system characteristics, while IM had the greatest effect. For all herbicides, the double rate treatment gave a greater statistical reduction than the single rate for root system characteristics. FE had the smallest effect on the activity of aerobic microorganisms, while DM gave the greatest reduction, 10 days after application, and all three herbicides reduced earthworm abundance. DM gave the smallest reduction in the number of tillers and in plant height, while the double rate of IM gave the greatest reduction. For all three herbicides, double the recommended rate resulted in a significant reduction in the weight of 1000 seeds, while no statistically significant deviations were noted at the recommended rate. Finally, the use of all three herbicides resulted in significantly lower statistical yields compared to the sample (control plot), although there were no significant statistical differences among them, for either recommended or double recommended rates.     

含铅的多元氢阴极电催化性能的研究

用电沉积法制备Ｍｏ－Ｗ－Ｎｉ－Ｐｂ－Ｃａ多元活性阴极，研究了在０．５ｍｏｌ／Ｌ Ｈ２ＳＯ４中的析氢反应，结果表明，多元阴极具有较高的电催化活性，其析氢过电位比软钢阴极降低３０５ｍＶ，ｉ０提高三个数量级，且有较好的稳定性，并用光电子能谱研究了表面组成和结构。证实表面有：Ｎｉ，ＮｉＯ，ＭｏＯ２，ＭｏＯ＾２－４，ＷＯ３，ＰｂＯ２，ＰｂＯ，Ｃａ＾＋＋等物质。     

四种叶形吸虫的染色体组型分析

应用一种自创小型复殖吸虫染色体制备法，对四种常见寄生鱼类的叶形吸虫（中华叶形吸虫、鳗鲡叶形吸虫、鲶叶形吸虫和巴氏叶形吸虫）的染色体组型分析表明，它们的有丝分裂中期染色体二倍体数目均为２ｎ＝１８，且核型十分接近，即由四对较长的具近端着丝点染色体，四对较短的具近中部着丝点染色体及一对具中部着丝点的短染色体组成。但是，它们在染色体相对长度方面存在一定的差异。聚类分析显示，中华叶形吸虫和鳗鲡叶形吸虫，鲶叶形吸虫和巴氏叶形吸虫分别组成一近缘类群。根据发状科各属虫种的染色体组型资料，探讨了该科吸虫的核型进化问题。     

Historical range of variability in eastern Cascades forests,Washington, USA

The historical range of variability (HRV) has been suggested as a coarse filter approach to maintain ecosystem sustainability and resiliency. The historical range of variability in forest age structure for the central eastern Cascade Range in Washington State, USA was developed from historical fire return intervals and the manner in which fire acted as both cyclic and stochastic processes. The proportions of seven forest structural stages calculated through these processes were applied to the area of each forest series within the central eastern Cascades landscape. Early successional forest stages were more common in high elevation forest than low elevation forest. The historical proportion of old growth and late successional forest varied from 38 to 63 percent of the forested landscape. These process-based estimates are consistent with those developed from forest structural information. HRV is a valuable planning tool for ecosystem conservation purposes, but must be applied to real landscapes with consideration of both temporal and spatial scale. This revised version was published online in July 2006 with corrections to the Cover Date.     

Phylogeny of the frosty pod rot pathogen of cocoa

Morphological, cytological and molecular evidence is presented which confirms that the frosty pod rot pathogen of cocoa, formerly classified as the mitosporic fungus Moniliophthora roreri (Deuteromycota), belongs to the hymenomycetous genus Crinipellis (Basidiomycota) and that two varieties should now be recognized: Crinipellis roreri var. roreri and the new variety C. roreri var. gileri . The latter was collected on Theobroma gileri , an endemic tree of submontane forests in north-west Ecuador, and can be distinguished from Ecuadorian and Peruvian isolates from cocoa ( T. cacao ) on the basis of spore morphology, incompatibility and nucleotide sequence data. As with var. roreri , meiosis is shown to occur within the dispersive and infective spore stage of var. gileri and these meiospores are interpreted to represent a much modified probasidium. In addition, in a field inoculation experiment, an isolate from T. gileri proved to be noninfective to cocoa pods when compared with positive control strains isolated from T. cacao in western Ecuador and T. bicolor in eastern Ecuador. It is concluded that var. gileri is the vestigial progenitor of the frosty pod rot pathogen of cocoa, with a host range and distribution restricted to T. gileri in the mesic forests of north-west South America.     

遗传与环境在生物进化中的关系

本文讨论了在生物进化的过程中遗传与环境的关系及遗传物质的范围和生物可塑性的问题。遗传物质的变异是进化的内因，环境对遗传物质的变异起到诱发与筛选的作用，进化后的生物对环境又有反作用。     

鸭流感病毒4/2004-H6N2亚型毒株的血凝素基因全序列克隆与分析

2004初从正常鸭群中分离到一株鸭源禽流感病毒，命名为A／Duck／HN／4／2004(H6N2)。经对血凝素基因(HA)序列分析发现HA基因全长为1744bp，共编码566个氨基酸，在裂解位点仅含一个碱性氨基酸-精氨酸(R)，符合LPAIV的标准。将所得基因序列与已发表的同一亚型参考序列分析表明，与H6亚型流感HA基因同源性为89．2％-97．1％，经分子遗传演化分析表明本次分离株与香港分离株A／Duck／Hong Kong／3600／99(H6N2)、A／Duck／Hong Kong／3600／99(H6N2)最近。     

大豆和百脉根古老原核基因的全基因组鉴定与比较分析

在漫长的进化过程中,高等真核生物从原核生物中获取了大量基因,对这些基因进行鉴定分析,可为研究高等植物系统演化及基因组水平比较分析提供理论依据。为了进一步解析大豆和百脉根古老原核基因在其基因组中所起的作用及进化关系,本研究利用生物信息学技术对大豆和百脉根基因组古老原核基因进行全基因组鉴定,并对其特征及功能进行了比较分析。研究结果表明,大豆(40.6%)古老原核基因的占比高于百脉根(33.9%),且多分布于内共生细胞器线粒体、叶绿体中。此外,古老原核蛋白质的结构域在大豆和百脉根基因组中的分布相似,表明其在大豆和百脉根进化过程中具有较高的共线性和保守性。通过GO注释发现大豆与百脉根中古老原核蛋白主要分布在膜系统、细胞、细胞组分中。在分子功能上,大豆古老原核蛋白更多地参与代谢和发育过程,这可能与其接受了更多的人为选育有关。在生物过程中,古老原核蛋白更多参与催化反应和结合反应,主要以酶的形式在发挥作用。通过比较分析,本研究揭示了古老原核蛋白在大豆和百脉根中进化的独特模式,可为其他豆科植物基因组分析提供一定理论基础。